Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BL01993acetyl-CoA synthetase. (650 aa)    
Predicted Functional Partners:
yngH
Carbamoyl-phosphate synthase L chain, ATP binding.
  
 0.970
BL01989
Pyruvate carboxylase.
    
  0.962
ywdH
Aldehyde dehydrogenase,Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.959
mmgD
Citrate synthase III; Belongs to the citrate synthase family.
  
 0.950
dhaS
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.948
citZ
Citrate synthase II; Belongs to the citrate synthase family.
  
 0.936
BL02644
Malate synthase A; Belongs to the malate synthase family.
   
 0.932
citA
Citrate synthase I; Belongs to the citrate synthase family.
  
 0.927
ytcI
AMP-dependent synthetase and ligase YtcI.
  
 
 
0.924
yqjD
Carboxyl transferase YqjD.
  
 0.924
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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