STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL02003Hypothetical protein. (524 aa)    
Predicted Functional Partners:
BL01970
Putative electron transporter.
       0.531
yfiC
ABC transporter.
   
   0.522
yfiB
ABC transporter.
   
   0.522
BL00280
Glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
    
  0.488
BL02681
Putative glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
    
  0.488
BL02002
Putative transcriptional regulator.
       0.484
yrrD
Photosynthetic reaction centre, H-chain, cytoplasmic.
  
     0.482
yhrR
Conserved hypothetical protein.
  
     0.416
BL00160
Hypothetical Bipartite response regulator, C-terminal effector.
  
     0.407
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.