yrrN protein (Bacillus licheniformis) - STRING interaction network

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Score

yrrN

Calcium-binding protein YrrN. (309 aa)

Predicted Functional Partners:

yrrM

0.995

yrrO

0.986

udk

0.915

ctaC

0.816

BL02100

0.766

ywzC

0.742

yrrL

0.674

ytqB

0.630

greA

0.602

BL02023

0.554

Your Current Organism:

Bacillus licheniformis

NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BL02023	greA	BL02023	BL02024	Penicillin-binding protein.	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.734
BL02023	udk	BL02023	BL02025	Penicillin-binding protein.	Uridine kinase.	0.560
BL02023	yrrL	BL02023	BL02029	Penicillin-binding protein.	Conserved protein YrrL; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.	0.474
BL02023	yrrM	BL02023	BL02028	Penicillin-binding protein.	SAM-dependent methyltransferase YrrM.	0.554
BL02023	yrrN	BL02023	BL02027	Penicillin-binding protein.	Calcium-binding protein YrrN.	0.554
BL02023	yrrO	BL02023	BL02026	Penicillin-binding protein.	Putative protease YrrO.	0.560
BL02100	yrrM	BL02100	BL02028	Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	SAM-dependent methyltransferase YrrM.	0.829
BL02100	yrrN	BL02100	BL02027	Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	Calcium-binding protein YrrN.	0.766
BL02100	yrrO	BL02100	BL02026	Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	Putative protease YrrO.	0.615
ctaC	yrrN	BL02980	BL02027	Cytochrome caa3 oxidase (subunit II); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Calcium-binding protein YrrN.	0.816
ctaC	yrrO	BL02980	BL02026	Cytochrome caa3 oxidase (subunit II); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).	Putative protease YrrO.	0.816
greA	BL02023	BL02024	BL02023	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Penicillin-binding protein.	0.734
greA	udk	BL02024	BL02025	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Uridine kinase.	0.636
greA	yrrL	BL02024	BL02029	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Conserved protein YrrL; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.	0.575
greA	yrrM	BL02024	BL02028	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	SAM-dependent methyltransferase YrrM.	0.602
greA	yrrN	BL02024	BL02027	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Calcium-binding protein YrrN.	0.602
greA	yrrO	BL02024	BL02026	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Putative protease YrrO.	0.611
udk	BL02023	BL02025	BL02023	Uridine kinase.	Penicillin-binding protein.	0.560
udk	greA	BL02025	BL02024	Uridine kinase.	Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.636
udk	yrrL	BL02025	BL02029	Uridine kinase.	Conserved protein YrrL; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.	0.752

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