STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL02112Hypothetical protein. (43 aa)    
Predicted Functional Partners:
holA
DNA polymerase III clamp loader subunit, C-terminal.
     
 0.851
ywjG
YwjG.
  
     0.756
ypiF
Hypothetical protein.
  
     0.735
yufK
Hypothetical protein.
  
   
 0.713
ykwB
GCN5-related N-acetyltransferase.
      
 0.705
ytpI
Conserved membrane protein YtpI.
  
     0.689
BL02742
Hypothetical protein.
  
     0.651
ytkA
Conserved protein YtkA.
  
   
 0.633
yuiB
Conserved membrane protein YuiB.
  
     0.625
hpr
Transcriptional regulator Hpr; Negative regulator of protease production and sporulation.
  
     0.620
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.