STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
padCPhenolic acid decarboxylase. (166 aa)    
Predicted Functional Partners:
padR
Transcriptional regulator.
 
  
 0.790
BL01810
Transcriptional regulator; BL01810 similar to padR from Bacillus subtilis.
 
  
 0.584
yxeA
Conserved hypothetical protein.
  
     0.544
yhcX
Conserved hypothetical protein YhcX.
      
 0.465
yvaB
Putative NAD(P)H dehydrogenase YvaB; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
      
 0.450
yclB
3-octaprenyl-4-hydroxybenzoate carboxy-lyase YclB; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.
 
   
 0.430
BL02131
Response regulator aspartate phosphatase.
       0.428
BL07056
Hypothetical protein; BLi03405.
       0.428
yclC
Carboxylyase-related protein YclC; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.
  
   
 0.424
BL02426
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.420
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.