STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yunBConserved protein YunB. (257 aa)    
Predicted Functional Partners:
spoIIE
Serine phosphatase.
  
     0.714
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.714
ydcC
Conserved membrane protein YdcC.
  
   
 0.709
spoVAC
SpoVAC.
  
     0.703
spoIIIAH
SpoIIIAH.
  
     0.703
spoIVA
Sporulation Stage IV protein A SpoIVA; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.697
ylbJ
YlbJ.
  
     0.687
yunC
Conserved protein YunC.
 
     0.686
spoIIP
SpoIIP.
  
     0.684
gerAA
Spore germination protein.
  
     0.676
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.