STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yunCConserved protein YunC. (101 aa)    
Predicted Functional Partners:
yunB
Conserved protein YunB.
 
     0.754
yqhG
Conserved protein YqhG.
  
     0.714
yunD
Putative nucleotidase YunD; Belongs to the 5'-nucleotidase family.
  
    0.709
yunE
Conserved protein YunE.
       0.679
yqgE
Sugar transporter superfamily.
  
     0.675
yunF
Conserved protein YunF.
       0.662
yabQ
Essential protein for formation of the spore cortex YabQ.
  
     0.654
cotE
Morphogenic protein.
  
     0.628
BL02741
Hypothetical protein.
  
     0.606
ydcC
Conserved membrane protein YdcC.
  
     0.587
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.