STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
csdCysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (406 aa)    
Predicted Functional Partners:
nifU-2
Nitrogen-fixing protein NifU.
 
 
 0.999
yurX
Conserved protein involved in Fe-S cluster formation YurX.
 
 
 0.999
yurY
ATP-binding protein involved in Fe-S cluster formation YurY.
 
  
 0.998
sufB
FeS assembly protein SufB.
 
 
 0.996
nifU
Fe-S cluster formation protein.
 
 
 0.969
trxB
Thioredoxin reductase.
   
 
  0.915
yjcI
Cys/Met metabolism pyridoxal-phosphate-dependent enzymes.
     
 0.901
yitW
N-6 Adenine-specific DNA methylase YitW.
 
  
 0.784
BL01872
Hypothetical protein.
    
   0.743
dhbF
DhbF.
   
  
 0.563
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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