STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bprABacillopeptidase F. (502 aa)    
Predicted Functional Partners:
lanP
Intracellular serine protease; Belongs to the peptidase S8 family.
  
     0.736
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
 
    0.630
yvpA
Polysaccharide Lyase Family 3; Catalyzes the depolymerization of both polygalacturonate and pectins of methyl esterification degree from 22 to 89%, with an endo mode of action. In contrast to the majority of pectate lyases, displays high activity on highly methylated pectins (By similarity). Belongs to the polysaccharide lyase 3 family.
   
 
 0.595
yerB
Conserved protein YerB.
  
  0.572
blaSE
Glutamyl Endo peptidase; Specific for hydrolysis of peptide bonds on the carboxyl side of acidic amino acid residues, with a strong preference for Glu.
    
 0.510
bprB
Bacillopeptidase F.
 
  
0.492
ywoF
Polysaccharide Lyase Family 9,YwoF.
   
  0.472
BL03072
Hypothetical protein.
   
  0.472
yuaB
Conserved hypothetical protein yuaB.
   
  0.472
yhjA
Conserved hypothetical protein.
   
  0.472
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.