STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bprABacillopeptidase F. (502 aa)    
Predicted Functional Partners:
lanP
Intracellular serine protease; Belongs to the peptidase S8 family.
  
     0.736
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
 
    0.629
bprB
Bacillopeptidase F.
 
   
0.475
yhcN
Conserved hypothetical protein.
  
     0.457
BL03138
Conserved hypothetical protein.
  
     0.440
yloB
ATPase, E1-E2 type protein.
   
   0.407
ahpF
Alkyl hydroperoxide reductase (large subunit) and NADH dehydrogenase.
  
   
 0.404
epr
Extracellular serine protease; Belongs to the peptidase S8 family.
  
   
0.404
wprA
Cell wall-associated protease.
  
   
0.402
yukA
Conserved protein YukA.
  
   0.400
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.