STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yaaIPutative Isochorismatase hydrolase YaaI. (180 aa)    
Predicted Functional Partners:
yaaH
Glycoside hydrolase, family 18, YaaH.
  
    0.785
yaaJ
Putative Cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.709
dck
Deoxyadenosine/deoxycytidine kinase.
  
    0.649
dgk
Deoxyguanosine kinase.
  
    0.649
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.598
dhbF
DhbF.
 
  
 0.470
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.449
yugU
Conserved protein YugU.
 
    0.420
dhbB
Isochorismatase.
  
   
0.420
ydaG
FMN-binding split barrel domain protein YdaG.
  
    0.417
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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