STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL02397Transcriptional regulator. (191 aa)    
Predicted Functional Partners:
cypE
Cytochrome P450 / NADPH-ferrihemoprotein reductase; In the N-terminal section; belongs to the cytochrome P450 family.
  
  
 0.980
yrhH
Putative SAM dependent methyltransferase YrrH.
  
 
 0.602
yerO
Probable transcriptional regulator (TetR/AcrR family).
  
     0.533
yuxN
Probable transcriptional regulator YuxN.
  
     0.491
BL00465
Possible transcriptional regulator.
  
     0.439
wprA
Cell wall-associated protease.
   
   0.418
BL02633
Putative transcriptional regulator.
  
     0.414
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.