STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yqhB2-oxo acid dehydrogenase, lipoyl-binding site protein. (432 aa)    
Predicted Functional Partners:
yqxL
Mg2+ transporter protein, CorA-like.
  
    0.812
ywtG-2
Sugar transporter YwtG; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
    0.663
bmrU
Multidrug resistance protein.
   
   0.647
ykgA
Putative transferase, conserved hypothetical protein.
   
    0.620
yflA
Sodium:alanine symporter YflA.
   
    0.616
yfkJ
Protein-tyrosine phosphatase YfkJ; Low molecular weight phosphotyrosine protein phosphatase.
   
    0.610
ydaG
FMN-binding split barrel domain protein YdaG.
   
    0.604
ytaB
Hypothetical membrane protein.
   
    0.556
yfkH
Possible RNase; Belongs to the UPF0761 family.
  
    0.507
yjgC
Iron-sulfur binding domain containing protein.
   
    0.494
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.