STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrgAAmmonium transporter. (403 aa)    
Predicted Functional Partners:
nrgB
Nitrogen-regulated PII-like protein; Belongs to the P(II) protein family.
 0.999
BL01313
Nitrogen-regulated PII-like protein.
 
 0.983
gltA
Glutamate synthase (large subunit).
 
  
 0.775
nasA
Nitrate transporter.
   
  
 0.572
gltB
Glutamate synthase (small subunit).
 
  
 0.536
yqhB
2-oxo acid dehydrogenase, lipoyl-binding site protein.
       0.468
citB
Aconitate hydratase (aconitase); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.465
BL03174
Two-component sensor histidine kinase.
   
 0.464
yhcY
ATP-binding region protein.
    
  0.456
glnR
Transcriptional regulator.
     
 0.453
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.