STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nrgAAmmonium transporter. (403 aa)    
Predicted Functional Partners:
nrgB
Nitrogen-regulated PII-like protein; Belongs to the P(II) protein family.
 
 0.999
BL01313
Nitrogen-regulated PII-like protein.
 
 
 0.973
gltA
Glutamate synthase (large subunit).
 
  
 0.926
glnA
Glutamine synthetase.
  
  
 0.693
gltB
Glutamate synthase (small subunit).
 
  
 0.503
tnrA
Transcriptional regulator.
  
  
 0.486
glnR
Transcriptional regulator.
     
 0.473
yqhB
2-oxo acid dehydrogenase, lipoyl-binding site protein.
       0.468
citB
Aconitate hydratase (aconitase); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.460
nasA
Nitrate transporter.
   
  
 0.458
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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