STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adhBAlcohol dehydrogenase. (377 aa)    
Predicted Functional Partners:
BL00199
Alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.931
adhA
NADP-dependent alcohol dehydrogenase.
 
0.929
dhaS
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.914
ywdH
Aldehyde dehydrogenase,Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.914
BL03214
Putative catalase YdbDA.
 
     0.645
ydbD
General stress protein,putative manganese-containing catalase.
 
     0.634
yraD
YraD.
 
    0.594
yhxC
Short-chain dehydrogenase/reductase SDR YhxC.
  
    0.584
yhdF
Short-chain dehydrogenase/reductase SDR YhdF.
  
    0.580
ydaD
Putative Short-chain dehydrogenase/reductase YdaD; Similar to alcohol dehydrogenase.
  
    0.569
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.