STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywtG-2Sugar transporter YwtG; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (478 aa)    
Predicted Functional Partners:
yqhB
2-oxo acid dehydrogenase, lipoyl-binding site protein.
   
    0.524
yjgC
Iron-sulfur binding domain containing protein.
   
 
  0.519
yflA
Sodium:alanine symporter YflA.
   
    0.511
ywjC
YwjC.
   
    0.506
ycdF
Glucose 1-dehydrogenase II.
   
    0.501
ykgA
Putative transferase, conserved hypothetical protein.
   
    0.501
BL03910
Putative transporter.
  
  
  0.498
metH
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.465
adhB
Alcohol dehydrogenase.
    
  0.459
yqxL
Mg2+ transporter protein, CorA-like.
   
    0.446
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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