STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywrDPeptidase T3, gamma-glutamyltranspeptidase. (527 aa)    
Predicted Functional Partners:
gltA
Glutamate synthase (large subunit).
  
  
 0.849
yhcX
Conserved hypothetical protein YhcX.
    
  0.736
feuC
Integral membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
      
 0.629
ggt
Gamma-glutamyltranspeptidase.
  
  
0.606
pepA
Peptidase M17, cytosol aminopeptidase, C-terminal; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 0.599
ywaD
Aminopeptidase.
  
  0.578
pgsAA
Poly-gamma-glutamate synthesis protein.
     
 0.577
ywrA
Chromate transporter YwrA.
 
     0.575
ywrC
Transcriptional regulator YwrC.
 
     0.571
ywrB
Chromate transporter YwrB.
 
     0.549
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.