STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywqEProtein tyrosine phoshpatase. (250 aa)    
Predicted Functional Partners:
ywqC
Modulator of YwqD tyrosine kinase.
 
 
 0.977
yveL
Putative capsular polysaccharide biosynthesis protein YveL.
  
 0.963
yveK
Putative capsular polysaccharide biosynthesis protein YveK.
 
 
 0.926
yfkJ
Protein-tyrosine phosphatase YfkJ; Low molecular weight phosphotyrosine protein phosphatase.
     
 0.620
ywlE
Low molecular weight phosphotyrosine protein phosphatase.
     
 0.617
yvfC
Putative sugar transferase YvfC.
 
  
 0.595
yabT
Putative serine/threonine-protein kinase.
    
   0.591
rsbT
Switch protein/serine-threonine kinase.
    
   0.591
tuaA
TuaA.
 
  
 0.537
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
  
 0.453
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.