STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ywqCModulator of YwqD tyrosine kinase. (240 aa)    
Predicted Functional Partners:
yveL
Putative capsular polysaccharide biosynthesis protein YveL.
 
 0.998
ywqE
Protein tyrosine phoshpatase.
 
 
 0.993
yabT
Putative serine/threonine-protein kinase.
    
   0.758
yveK
Putative capsular polysaccharide biosynthesis protein YveK.
    
   0.758
yvfC
Putative sugar transferase YvfC.
 
  
 0.750
tuaA
TuaA.
 
  
 0.709
yveM
Putative capsular polysaccharide biosynthesis protein YveM.
 
  
 0.648
mrp
Putative ATP-binding protein Mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.580
BL00696
Polysaccharide biosynthesis protein.
 
  
 0.498
yvfF
Polysaccharide pyruvyl transferase YvfF.
 
  
 0.476
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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