STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xpaCXpaC. (205 aa)    
Predicted Functional Partners:
yaaN
Putative Toxic anion resistance protein YaaN; Belongs to the TelA family.
 
  
 0.980
yceH
Putative signal peptide binding protein YceH; Belongs to the TelA family.
 
  
 0.898
BL02230
Peptidoglycan-binding protein.
  
     0.701
ykvS
Hypothetical protein.
  
     0.673
mreD
Cell-shape determining protein.
  
     0.604
yneA
Peptidoglycan-binding protein YneA; Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and/or DivIC to the division machinery; Belongs to the YneA family.
  
     0.600
yisL
Conserved membrane protein.
  
     0.562
yfkK
Conserved protein YfkK; Belongs to the UPF0435 family.
  
     0.554
yhjE
Conserved hypothetical protein YhjE.
  
   
 0.551
csbA
Putative membrane protein.
  
     0.541
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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