STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yaaNPutative Toxic anion resistance protein YaaN; Belongs to the TelA family. (397 aa)    
Predicted Functional Partners:
xpaC
XpaC.
 
  
 0.981
yceG
Conserved hypothetical protein YceG.
  
  
 0.766
yaaO
Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase.
  
    0.554
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.531
mreD
Cell-shape determining protein.
  
     0.480
yceF
Integral membrane protein TerC family, YceF.
  
    0.450
ykoY
Integral membrane protein.
  
    0.447
ykuJ
YkuJ.
  
     0.444
yceC
Putative stress response protein YceC.
  
  
 0.436
csfB
CsfB; sigma-F-transcribed gene.
       0.427
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.