STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ktrAK+ transporter subunit peripherally bound to the cytoplasmic membrane. (218 aa)    
Predicted Functional Partners:
ktrB
K+ transporter integral membrane subunit.
 
 
 0.995
ktrD
Cation transporter.
 
 
 0.954
BL03955
K+ transporter integral membrane subunit.
 
 
 0.944
cinA
Competence-damage inducible protein; Belongs to the CinA family.
    
 0.785
rsmB
rRNA SAM-dependent methyltransferase RmsB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.714
moaE
Molybdopterin converting factor (subunit 2).
   
    0.642
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
       0.506
nasF
uroporphyrin-III C-methyltransferase.
  
    0.447
mscL
Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
     
 0.420
yjjA
Putative Uroporphyrinogen III synthase YjjA.
  
    0.413
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.