STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL02519Proline transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (542 aa)    
Predicted Functional Partners:
BL03072
Hypothetical protein.
 
     0.716
ycgM
Putative proline dehydrogenase YcgM.
  
  
 0.660
BL03174
Two-component sensor histidine kinase.
   
 
 0.637
BL03073
Hypothetical protein.
 
     0.611
nos
Nitric oxide synthase Nos; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.592
cstA
Carbon starvation-induced protein.
  
    0.567
yuaC
Hypothetical protein; Belongs to the GbsR family.
       0.507
gbsA
Glycine betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.451
BL01661
Putative Proteinase inhibititor I4, serpin; Belongs to the serpin family.
  
     0.449
BL02849
Conserved hypothetical protein; Putative thioesterase.
  
     0.432
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.