STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yugTGlycoside Hydrolase Family 13, YugT. (560 aa)    
Predicted Functional Partners:
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
  
 
 0.891
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
  
 
 0.891
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
  
 
 0.891
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
  
 
 0.891
amyL
Alpha amylase, Glycoside Hydrolase Family 13; BL00499 similar to treA from Bacillus subtilis.
  
  
 0.828
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.756
sacB
Levansucrase, Glycoside Hydrolase Family 68; Belongs to the glycosyl hydrolase 68 family.
   
 
 0.743
treP
Phosphotransferase system (PTS) trehalose-specific enzyme IIBC component.
 
 
 0.719
amyX
Putative pullulanase, Glycoside Hydrolase Family 13, AmyX; Belongs to the glycosyl hydrolase 13 family.
 
 0.704
yvdF
Glycoside Hydrolase Family 13 YvdF; Putative neopullulanase.
 
 
0.701
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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