STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
yjcKPutative ribosomal-protein-alanine N-acetyltransferase YjcK. (180 aa)    
Predicted Functional Partners:
BL02627
Putative inosine-uridine preferring nucleoside hydrolase.
       0.775
BL05251
GCN5-related N-acetyltransferase.
  
     0.687
yrzI
YrzI.
      
 0.598
BL02529
GCN5-related N-acetyltransferase.
  
     0.589
BL01340
N-acetyltransferase.
  
     0.586
BL03216
GCN5-related N-acetyltransferase.
  
     0.581
yerQ
Putative kinase related to diacylglycerol kinase YerQ.
  
    0.486
ykkB
GCN5-related N-acetyltransferase.
  
     0.479
BL03211
GCN5-related N-acetyltransferase.
  
     0.456
yokL
Putative N-acetyltransferase.
  
     0.450
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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