STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swrCSwarming and motility protein SwrC; Involved in the efflux of surfactin; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1052 aa)    
Predicted Functional Partners:
yknX
Putative secretion protein, protein transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.978
secDF
Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
 
 0.867
yrbF
Preprotein translocase subunit YrbF.
  
 
 
 0.829
yhbJ
Conserved protein YhbJ.
    
 0.577
yhbJ-2
Putative transporter YhbJ.
    
 0.577
yerO
Probable transcriptional regulator (TetR/AcrR family).
  
    0.566
BL07006
Hypothetical protein; BLi00738, RBL05391.
       0.477
ymcC
Hypothetical protein.
  
     0.456
cheV
CheV.
 
   
 0.435
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.