STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
licTTranscriptional antiterminator. (277 aa)    
Predicted Functional Partners:
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 
 0.924
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 0.915
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
 
 
 0.857
sacX
Negative regulatory protein of SacY.
 
 
 0.788
sacP
Phosphotransferase system (PTS) sucrose-specific enzyme IIBC component.
 
 
 0.761
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
 
 
 
 0.718
bglH
Beta-glucosidase, Glycoside Hydrolase Family 1; Belongs to the glycosyl hydrolase 1 family.
 
   
 0.699
ybbF
Phosphotransferase system PTS, EIIB domain,Phosphotransferase system, EIIC; Probable PTS sucrose-specific enzyme IIBC component.
 
 
 0.689
treP
Phosphotransferase system (PTS) trehalose-specific enzyme IIBC component.
 
 
 0.668
lanA
Lichenicidin prepeptide; Lanthionine-containing peptide antibiotic (lantibiotic) active on Gram-positive bacteria. The bactericidal activity of lantibiotics is based on depolarization of energized bacterial cytoplasmic membranes, initiated by the formation of aqueous transmembrane pores. When present individually, LchA1 exhibits activity towards L.lactis HP. When combined with LchA2, it displays activity towards a broad spectrum of non-pathogenic and pathogenic Gram-positive bacteria including strains of L.monocytogenes, methicillin-resistant S.aureus, S.pneumoniae and strains of vanco [...]
      
 0.573
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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