STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL02653Glycoside Hydrolase Family 43; Belongs to the glycosyl hydrolase 43 family. (328 aa)    
Predicted Functional Partners:
yetA
Conserved hypothetical protein; Molecular Function: carboxypeptidase A activity, Biological Process: proteolysis and peptidolysis.
  
 
  0.776
yesX
Polysaccharide lyase Family 11.
  
 
  0.767
yesW
Putative polysaccharide lyase family 11 protein.
  
 
  0.767
yesY
Carbohydrate esterase, Family 12 YesY.
  
 
  0.752
BL00947
Pectate lyase, Polysaccharide Lyase Family 1; Cleaves unsaturated oligo-galacturonides from pectin. The major product is trigalacturonate; digalacturonate and tetragalacturonate are also produced. Activity on methylated pectins decreases with an increasing degree of methylation (By similarity). Belongs to the polysaccharide lyase 1 family.
 
     0.751
yesT
Putative carbohydrate esterase, Family 12, YesT.
  
  
  0.746
BL03784
Putative carbohydrate esterase Family 12.
  
  
  0.744
celC
Glycoside Hydrolase Family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.742
BL00567
Carbohydrate Esterase Family 12, putative beta-tubulin.
  
  
  0.741
BL00724
Carbohydrate Esterase Family 8 protein.
 
     0.738
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.