STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yngAConserved membrane protein YngA. (131 aa)    
Predicted Functional Partners:
yngB
UTP--glucose-1-phosphate uridylyltransferase YngB.
  
  
 0.765
BL02665
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.746
ykcB
Glycosyl transferase, family 39.
 
  
 0.643
yycA
Glycosyl transferase, family 39.
 
  
 0.612
yngC
Conserved membrane protein YngC.
     
 0.578
ykcC
Glycosyl transferase, family 2.
 
 
 0.563
yvfF
Polysaccharide pyruvyl transferase YvfF.
  
     0.506
tuaE
TuaE.
 
    0.503
nucB
Nuclease.
  
     0.468
yjcF
Probable acetyltransferase YjcF.
       0.468
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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