STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
yngBUTP--glucose-1-phosphate uridylyltransferase YngB. (296 aa)    
Predicted Functional Partners:
BL02665
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.982
tuaD
UDP-glucose 6-dehydrogenase TuaD.
 
 0.970
pgcA
Alpha Phosphoglucomutase PgcA; Similar to B.subtilis pgcA.
    
 0.953
BL03106
NAD-dependent epimerase/dehydratase.
 
 
 0.931
galT
Galactose-1-phosphate uridyltransferase.
     
 0.926
BL01937
UDP-glucose 4-epimerase.
 
  
 0.926
BL03353
UDP-glucose 4-epimerase.
 
 
 0.926
galE-2
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.926
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.925
amyX
Putative pullulanase, Glycoside Hydrolase Family 13, AmyX; Belongs to the glycosyl hydrolase 13 family.
     
 0.911
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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