STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cotYSpore coat protein (insoluble fraction). (162 aa)    
Predicted Functional Partners:
cotX
Spore coat protein (insoluble fraction).
 
  
 0.976
cotW
Spore coat protein (insoluble fraction).
  
  
 0.908
cotV
Spore coat protein (insoluble fraction).
  
  
 0.901
BL03137
Hypothetical protein.
  
     0.749
spoVIF
SpoVIF.
 
    0.724
ylqG
Conserved hypothetical protein.
  
     0.707
ydaN
Putative cellulose synthase.
  
     0.705
yknT
sigma-E controlled sporulation protein.
  
   
 0.697
tasA
Translocation-dependent antimicrobial spore component.
  
     0.697
ybyB
Conserved hypothetical protein YbyB.
  
     0.686
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.