STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL02680Putative Glycoside Hydrolase Family 3. (981 aa)    
Predicted Functional Partners:
BL02681
Putative glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.948
chi
Conserved protein, Glycoside Hydrolase Family 18; Chitnase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.817
celC
Glycoside Hydrolase Family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.800
ybbE
Putative beta-lactamase YbbE.
  
 
 0.763
BL00874
Phage related protein.
   
 
  0.731
BL05129
Phage related protein.
   
 
  0.731
ybbC
Conserved hypothetical protein YbbC.
  
 
 0.720
celB
Glycoside Hydrolase Family 48.
  
  
  0.710
celA
Glycoside Hydrolase Family 9.
  
  
  0.700
BL02682
Binding-protein-dependent transport systems inner membrane component.
  
    0.688
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.