STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL02684Putative Extracellular solute-binding protein. (404 aa)    
Predicted Functional Partners:
BL02682
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.971
BL02683
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.970
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.958
yesP
Putatice transporter permease protein YesP.
 
 
 0.891
yurN
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.888
araP
Integral membrane protein.
 
 
 0.887
yesQ
Probable transporter permease protein YesQ.
 
 
 0.886
BL01931
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.882
araQ
Integral membrane protein.
 
 
 0.880
amyD
Sugar transporter AmyD.
 
 
 0.878
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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