STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yybANegative regulator of yyaTS - YybA. (150 aa)    
Predicted Functional Partners:
paiA
Transcriptional regulator PaiA.
    0.981
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
   
 
 0.738
paiB
Transcriptional regulator.
 
     0.728
yyaS
Conserved membrane protein YyaS.
 
     0.718
yybP
YybP.
      
 0.585
ynbA
GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
      
 0.581
ykaA
Putative gamma glutamyl tranferase YkaA.
   
  
 0.562
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.