STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywbODSBA oxidoreductase YwbO; Conserved protein B.clausii gene name: FrnE. (214 aa)    
Predicted Functional Partners:
BL01574
Conserved protein YqgZ; Belongs to the ArsC family.
   
   0.702
yusI
Conserved hypothetical protein YusI; Belongs to the ArsC family.
   
   0.702
spx
Glutaredoxin family protein Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.
   
   0.702
bdbD
Thiol-disulfide oxidoreductase.
  
 
 0.577
BL02708
Hypothetical protein.
       0.565
bmrA
ABC transporter; Multidrug resistance protein.
       0.499
ylxG
Flagellar hook capping protein.
    
   0.457
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.457
yjbI
Truncated form of bacterial hemoglobin YjbI.
  
  
 0.456
BL02725
Conserved hypothetical protein.
       0.448
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.