STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aadKAminoglycoside 6-adenylyltransferase. (296 aa)    
Predicted Functional Partners:
yfnB
HAD-superfamily hydrolase, subfamily IA, variant 1 YfnB.
     
 0.606
BL02711
Conserved hypothetical kinase-like protein.
       0.584
ycbJ
Putative Macrolide 2'-phosphotransferase; mphBM in S.aureus.
      
 0.542
ykcA
Glyoxalase/Bleomycin resistance protein/dioxygenase domain superfamily protein.
      
 0.542
BL02709
Conserved hypothetical protein.
       0.517
ywhB
Putative 4-oxalocrotonate tautomerase.
     
 0.479
BL03908
4-oxalocrotonate tautomerase.
     
 0.429
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.