STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ybbFPhosphotransferase system PTS, EIIB domain,Phosphotransferase system, EIIC; Probable PTS sucrose-specific enzyme IIBC component. (455 aa)    
Predicted Functional Partners:
ypqE
Putative PTS system IIA component.
 
 0.973
sacA
Glycoside Hydrolase Family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.962
fruA-2
Glycoside Hydrolase Family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.950
sacX
Negative regulatory protein of SacY.
 
 
0.924
sacP
Phosphotransferase system (PTS) sucrose-specific enzyme IIBC component.
 
 
0.921
fruA
Phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
  
  
 0.916
manP
Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component.
  
  
 0.915
BL00298
PTS phosophotransferase.
  
 
 0.915
ptsH
Histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) (HPr protein).
  
 
 0.915
ybbH
Probable transcriptional regulator YbbH.
  
  
 0.897
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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