STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ybbIPutative sugar phosphate isomerase YbbI; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (304 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase (Carbohydrate esterase Family 9).
  
 0.977
ybbH
Probable transcriptional regulator YbbH.
 
  
 0.963
ybbD
Glycoside hydrolase, family 3; Probable beta-hexosaminidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.952
ybbE
Putative beta-lactamase YbbE.
 
    0.933
nagP
Phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component.
  
 
 0.919
BL01637
Phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component.
  
 
 0.919
ypqE
Putative PTS system IIA component.
    
 0.909
murQ2
Hypothetical protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
  
 
0.906
ybbC
Conserved hypothetical protein YbbC.
 
    0.849
ybbF
Phosphotransferase system PTS, EIIB domain,Phosphotransferase system, EIIC; Probable PTS sucrose-specific enzyme IIBC component.
 
  
 0.793
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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