STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL02723ABC transporter,ATP/GTP-binding site motif A (P-loop). (293 aa)    
Predicted Functional Partners:
BL02724
Conserved hypothetical protein; Putative transcriptional regulator.
 
  
 0.952
BL02722
Hypothetical protein.
 
     0.943
BL00283
Putative transcriptional regulator, GntR family.
 
  
 0.797
BL00285
Hypothetical protein.
 
     0.695
ytrA
Transcriptional regulator YtrA.
 
    0.638
BL01807
Putative permease.
  
   0.502
ytrF
Possible acetoin transport system substrate binding protein YtrF.
  
  
 0.498
BL05021
Conserved hypothetical protein.
  
   0.477
ycbO
Conserved hypothetical protein YcbO.
  
   0.460
yfiB
ABC transporter.
  
 
  0.445
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.