Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL03958 | kipA | BL03958 | BL02810 | Transcriptional regulator (IclR family). | KipA. | 0.715 |
| BL03958 | kipI | BL03958 | BL02809 | Transcriptional regulator (IclR family). | Kinase inhibitor KipI. | 0.763 |
| BL03958 | ycsF | BL03958 | BL02806 | Transcriptional regulator (IclR family). | Putative lactam utilization protein YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.423 |
| BL03958 | ycsG | BL03958 | BL02807 | Transcriptional regulator (IclR family). | Putative branched chain amino acids transporter YcsG. | 0.424 |
| BL03958 | ycsI | BL03958 | BL02808 | Transcriptional regulator (IclR family). | Conserved protein YcsI; Belongs to the D-glutamate cyclase family. | 0.517 |
| accC | gltA | BL01530 | BL01971 | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Glutamate synthase (large subunit). | 0.750 |
| accC | kipA | BL01530 | BL02810 | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | KipA. | 0.941 |
| accC | kipI | BL01530 | BL02809 | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Kinase inhibitor KipI. | 0.458 |
| accC | pycA | BL01530 | BL02976 | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.477 |
| accC | yngH | BL01530 | BL01988 | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Carbamoyl-phosphate synthase L chain, ATP binding. | 0.563 |
| gltA | accC | BL01971 | BL01530 | Glutamate synthase (large subunit). | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.750 |
| gltA | kipA | BL01971 | BL02810 | Glutamate synthase (large subunit). | KipA. | 0.769 |
| gltA | kipI | BL01971 | BL02809 | Glutamate synthase (large subunit). | Kinase inhibitor KipI. | 0.760 |
| gltA | pycA | BL01971 | BL02976 | Glutamate synthase (large subunit). | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.815 |
| gltA | yngH | BL01971 | BL01988 | Glutamate synthase (large subunit). | Carbamoyl-phosphate synthase L chain, ATP binding. | 0.750 |
| kipA | BL03958 | BL02810 | BL03958 | KipA. | Transcriptional regulator (IclR family). | 0.715 |
| kipA | accC | BL02810 | BL01530 | KipA. | acetyl-CoA carboxylase subunit (biotin carboxylase subunit); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.941 |
| kipA | gltA | BL02810 | BL01971 | KipA. | Glutamate synthase (large subunit). | 0.769 |
| kipA | kipI | BL02810 | BL02809 | KipA. | Kinase inhibitor KipI. | 0.999 |
| kipA | kipR | BL02810 | BL02811 | KipA. | Transcriptional regulator KipR. | 0.928 |
page 1 of 4