STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtlDMannitol-1-phosphate dehydrogenase. (379 aa)    
Predicted Functional Partners:
mtlR
Transcriptional regulator MtlR; BL02816 similar to mtlR from Bacillus subtilis, name change PiRa.
  
 0.968
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
 
  
 0.928
manA
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
     
 0.904
ywjI
GlpX.
     
 0.904
pmi
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
     
 0.903
ydhR
Conserved hypothetical protein.
     
 0.902
BL02488
Beta-ketoacyl-acyl carrier protein reductase.
     
  0.900
BL01774
Transcriptional regulator; BL01774 similar to mtlR from Bacillus subtilis.
 
  
 0.708
manR
Transcriptional regulator.
 
  
 0.675
licR
Transcriptional regulator.
 
  
 0.657
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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