STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydaEYdaE. (167 aa)    
Predicted Functional Partners:
ydaD
Putative Short-chain dehydrogenase/reductase YdaD; Similar to alcohol dehydrogenase.
  
 
 0.920
xylB
Xylulose kinase.
 
  
  0.633
mtlD
Mannitol-1-phosphate dehydrogenase.
    
  0.609
yhdF
Short-chain dehydrogenase/reductase SDR YhdF.
   
 
 0.569
ydbD
General stress protein,putative manganese-containing catalase.
   
  
 0.508
mtlR
Transcriptional regulator MtlR; BL02816 similar to mtlR from Bacillus subtilis, name change PiRa.
       0.486
yulC
Putative Carbohydrate kinase YulC.
 
  
  0.484
uxaB
Tagaturonate reductase (altronate oxidoreductase).
    
  0.478
iolI
IolI; Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6/3,5-pentahydroxycyclohexanone) to 1- keto-D-chiro-inositol (1KDCI or 2,3,5/4,6-pentahydroxycyclohexanone). Belongs to the IolI family.
  
  
  0.465
yfkM
General stress protein YfkM.
   
  
 0.461
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.