STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmXMultiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
yvfM
Binding-protein-dependent transport system, inner membrane component protein.
 
 0.993
mdxG
MdxG - part of ABC transport system for maltodextrins, membrane spanning component.
 
 0.992
amyD
Sugar transporter AmyD.
 
 0.987
araP
Integral membrane protein.
 
 0.986
yvfL
Binding-protein-dependent transport systems inner membrane component.
 
 0.984
mdxF
Maltodextrin transport system permease protein MdxF.
 
 0.984
cycB
Putative extracellular solute-binding protein, family 1 CycB.
 
 0.982
araQ
Integral membrane protein.
 
 0.981
amyC
Maltose transport protein AmyC.
 
 0.981
mdxE
MdxE is substrate binding part of the maltodextrin ABC transport system.
 
 0.980
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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