STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yheGConserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
ydaG
FMN-binding split barrel domain protein YdaG.
  
    0.688
yjbC
GCN5-related N-acetyltransferase.
   
    0.645
yfhF
Conserved hypothetical protein, YfcH; NAD dependent epimerase/dehydratase family.
   
    0.558
BL01456
Predicted permease/membrane protein.
   
    0.557
ycgR
Putative permease YcgR; Conserved membrane protein.
   
    0.557
yugJ
Iron-containing alcohol dehydrogenase YugJ.
  
    0.556
nos
Nitric oxide synthase Nos; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.556
arcA
Arginine deiminase.
   
    0.555
ydaT
Conserved protein YdaT.
   
    0.553
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.508
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.