STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yhaNConserved hypothetical protein YhaN. (988 aa)    
Predicted Functional Partners:
yhaO
Conserved hypothetical protein YhaO; Molecular Function: hydrolase activity.
 
 
 0.968
yhaM
Nucleic acid-binding protein; Shows a 3'-5' exoribonuclease activity.
 
    0.776
yqgU
Conserved protein YqgU.
  
     0.683
yhaL
Conserved hypothetical protein YhaL.
       0.637
yhaP
Conserved hypothetical protein YhaP.
       0.574
yhaQ
ABC transporter YhaQ.
       0.572
BL02828
Hypothetical protein.
       0.562
uvrX
UV-damage repair protein UvrX; Belongs to the DNA polymerase type-Y family.
  
     0.494
yycH
Conserved protein YycH.
  
     0.436
yvdJ
Conserved membrane protein YvdJ.
  
     0.432
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.