STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhaREnoyl-CoA hydratase/isomerase YhaR. (258 aa)    
Predicted Functional Partners:
mmgB
3-hydroxybutyryl-CoA dehydrogenase.
 0.959
mmgA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.909
yusK
Putative acetyl-CoA C-acyltransferase YusK; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.906
mmgC
acyl-CoA dehydrogenase.
  
  0.886
acdA
acyl-CoA dehydrogenase.
  
  0.883
yngJ
Acyl-CoA dehydrogenase.
  
  0.880
BL00291
Acyl-CoA dehydrogenase.
  
  0.874
dhbF
DhbF.
  
 0.864
yusJ
Acyl-CoA dehydrogenase YusJ.
  
  0.856
BL03174
Two-component sensor histidine kinase.
   
 0.847
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.