STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lytECell wall hydrolase phosphatase-associated protein. (277 aa)    
Predicted Functional Partners:
yoeB
Conserved hypothetical protein YoeB.
    
 
 0.956
lytD
N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 73.
   
  
 0.853
mreBH
Cell-shape determining protein.
 
   
 0.727
ctpB
Peptidase S41A, C-terminal protease; Belongs to the peptidase S41A family.
  
 
 0.704
ftsX
Cell-division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.687
cwlO
Putative peptidoglycan hydrolase, DL-endopeptidase II family; Shows a cell wall hydrolytic DL-endopeptidase activity. Belongs to the peptidase C40 family.
 
  
0.662
ftsE
Cell-division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.656
mbl
MreB-like protein.
 
   
 0.655
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
 
  
 0.651
yycF
Putative two-component response regulator YycF.
      
 0.596
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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