STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytECell wall hydrolase phosphatase-associated protein. (277 aa)    
Predicted Functional Partners:
yhcR
Nucleic acid-binding hydrolase YhcR.
    
 0.815
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
 
 
 0.806
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
    
  0.774
cwlO
Putative peptidoglycan hydrolase, DL-endopeptidase II family; Shows a cell wall hydrolytic DL-endopeptidase activity. Belongs to the peptidase C40 family.
 
  
0.747
guaB
Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.745
cinA
Competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.729
lytD
N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 73.
   
  
 0.709
yocH
Putative peptidogycan hydrolase YocH.
  
 
0.631
prkC
Protein kinase PrkC.
 
  
 0.588
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.571
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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