STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL02962Putative Glycosyl transferase, family 2. (752 aa)    
Predicted Functional Partners:
yxkH
Polysaccharide deacetylase, Carbohydrate Esterase Family 4.
  
 
 0.857
chi
Conserved protein, Glycoside Hydrolase Family 18; Chitnase; Belongs to the glycosyl hydrolase 18 family.
    
 0.810
bglC
Endo-1,4-beta-glucanase, Glycoside hydrolase Family 5.
   
  0.809
BL03108
Putative glycosyl transferase family 2/4 protein.
  
 
 0.794
ypiA
TPR-repeat containing conserved hypothetical protein.
  
 
 0.744
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
 
 0.699
dhbF
DhbF.
  
 
 0.620
ydaJ
Putative Glycoside transferase.
  
 
 0.617
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.609
ykuI
YkuI.
  
 
 0.591
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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