STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL03004GCN5-related N-acetyltransferase. (161 aa)    
Predicted Functional Partners:
ydaG
FMN-binding split barrel domain protein YdaG.
  
    0.688
ywnB
YwnB.
  
    0.687
yclF
Putative oligo-peptide transporter.
   
    0.633
yfhF
Conserved hypothetical protein, YfcH; NAD dependent epimerase/dehydratase family.
  
    0.632
arcA
Arginine deiminase.
   
    0.631
yugJ
Iron-containing alcohol dehydrogenase YugJ.
   
    0.624
yhgC
Conserved hypothetical protein YhgC.
   
    0.566
ytxH
Conserved protein YtxH.
   
    0.553
bdbC
Thiol-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
       0.524
bdbD
Thiol-disulfide oxidoreductase.
       0.524
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.