STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yvgWHeavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase,Heavy metal translocating P-type ATPase. (703 aa)    
Predicted Functional Partners:
copZ
Copper binding protein CopZ.
  
 
 0.943
BL03129
Hypothetical DNA-binding protein.
 
  
 0.699
czcD
Cation-efflux system membrane protein.
  
  
 0.590
bdbD
Thiol-disulfide oxidoreductase.
   
   0.548
ycnJ
Putative copper export protein YcnJ.
     
 0.545
yvgZ
Conserved hypothetical protein YvgZ.
 
  
 0.525
bdbC
Thiol-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
       0.500
mntH
Manganese transporter; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
 
 0.458
BL02684
Putative Extracellular solute-binding protein.
       0.451
BL05197
Hypothetical DNA-binding protein.
  
  
 0.430
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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