STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acoRTranscriptional regulator. (611 aa)    
Predicted Functional Partners:
sigL
RNA polymerase sigma-54 factor (sigma-L).
 
  
 0.919
acoB
Acetoin dehydrogenase E1 component (TPP-dependent beta subunit).
 
   
 0.818
acoL
Acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase).
 
   
 0.773
acoC
Acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
     
 0.599
acoA
Acetoin dehydrogenase E1 component (TPP-dependent alpha subunit).
 
   
 0.576
cstA
Carbon starvation-induced protein.
  
    0.477
rbsA
Ribose ABC transporter (ATP-binding protein); Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
   
    0.475
rbsR
Transcriptional regulator (LacI family).
   
    0.453
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.