STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acoRTranscriptional regulator. (611 aa)    
Predicted Functional Partners:
sigL
RNA polymerase sigma-54 factor (sigma-L).
 
  
 0.910
acoL
Acetoin dehydrogenase E3 component (dihydrolipoamide dehydrogenase).
 
   
 0.853
acoB
Acetoin dehydrogenase E1 component (TPP-dependent beta subunit).
 
   
 0.619
acoC
Acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
     
 0.610
acoA
Acetoin dehydrogenase E1 component (TPP-dependent alpha subunit).
 
   
 0.584
spo0F
Two-component response regulator.
 
   
  0.467
BL03174
Two-component sensor histidine kinase.
  
  
 0.453
spo0A
Two-component response regulator; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
     
 0.430
alsR
Transcriptional regulator (LysR family); Belongs to the LysR transcriptional regulatory family.
      
 0.422
BL05187
Phage-like protein.
  
   
 0.409
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.